IL_6BOK_195
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- UGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_195 not in the Motif Atlas
- Geometric match to IL_4LFB_023
- Geometric discrepancy: 0.0975
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
6BOK|1|DB|U|580
6BOK|1|DB|G|581
6BOK|1|DB|U|582
6BOK|1|DB|A|583
6BOK|1|DB|G|584
*
6BOK|1|DB|U|757
6BOK|1|DB|G|758
6BOK|1|DB|A|759
6BOK|1|DB|G|760
6BOK|1|DB|G|761
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain BD
- 30S ribosomal protein S17
- Chain EB
- Large subunit ribosomal RNA; LSU rRNA
- Chain SC
- 30S ribosomal protein S8
- Chain WC
- 30S ribosomal protein S12
- Chain ZC
- 30S ribosomal protein S15
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