IL_6BY1_362
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- CGCAGG*CUCAGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BY1_362 not in the Motif Atlas
- Geometric match to IL_1MFQ_007
- Geometric discrepancy: 0.3634
- The information below is about IL_1MFQ_007
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_35186.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6BY1|1|BA|C|580
6BY1|1|BA|G|581
6BY1|1|BA|C|582
6BY1|1|BA|A|583
6BY1|1|BA|G|584
6BY1|1|BA|G|585
*
6BY1|1|BA|C|756
6BY1|1|BA|U|757
6BY1|1|BA|C|758
6BY1|1|BA|A|759
6BY1|1|BA|G|760
6BY1|1|BA|G|761
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BH
- 30S ribosomal protein S8
- Chain BL
- 30S ribosomal protein S12
- Chain BO
- 30S ribosomal protein S15
- Chain BQ
- 30S ribosomal protein S17
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
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