IL_6D90_364
3D structure
- PDB id
- 6D90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCGAGC*GGCUCU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6D90_364 not in the Motif Atlas
- Geometric match to IL_3IGI_015
- Geometric discrepancy: 0.3246
- The information below is about IL_3IGI_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_95349.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
6D90|1|5|G|4095
6D90|1|5|C|4096
6D90|1|5|G|4097
6D90|1|5|A|4098
6D90|1|5|G|4099
6D90|1|5|C|4100
*
6D90|1|5|G|4108
6D90|1|5|G|4109
6D90|1|5|C|4110
6D90|1|5|U|4111
6D90|1|5|C|4112
6D90|1|5|U|4113
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain G
- eL8
- Chain g
- eL34
Coloring options: