IL_6DZI_153
3D structure
- PDB id
- 6DZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6DZI_153 not in the Motif Atlas
- Geometric match to IL_5J7L_034
- Geometric discrepancy: 0.1818
- The information below is about IL_5J7L_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
6DZI|1|h|G|653
6DZI|1|h|G|654
6DZI|1|h|A|655
6DZI|1|h|A|656
6DZI|1|h|U|657
6DZI|1|h|U|658
*
6DZI|1|h|A|692
6DZI|1|h|G|693
6DZI|1|h|G|694
6DZI|1|h|A|695
6DZI|1|h|A|696
6DZI|1|h|C|697
Current chains
- Chain h
- 16S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain n
- 30S ribosomal protein S6
- Chain r
- 30S ribosomal protein S18 1
- Chain t
- 30S ribosomal protein S11
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