IL_6ELZ_049
3D structure
- PDB id
- 6ELZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AAA*UGAGGU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ELZ_049 not in the Motif Atlas
- Geometric match to IL_7ELQ_002
- Geometric discrepancy: 0.3972
- The information below is about IL_7ELQ_002
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
6ELZ|1|1|A|1489
6ELZ|1|1|A|1490
6ELZ|1|1|A|1491
*
6ELZ|1|1|U|1837
6ELZ|1|1|G|1838
6ELZ|1|1|A|1839
6ELZ|1|1|G|1851
6ELZ|1|1|G|1852
6ELZ|1|1|U|1853
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain g
- 60S ribosomal protein L34-A
- Chain j
- 60S ribosomal protein L37-A
Coloring options: