3D structure

PDB id
6ENF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GGUU*AC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ENF_045 not in the Motif Atlas
Homologous match to IL_7RQB_050
Geometric discrepancy: 0.1493
The information below is about IL_7RQB_050
Detailed Annotation
Major groove platform; stack outside cWW
Broad Annotation
No text annotation
Motif group
IL_50694.2
Basepair signature
cWW-tSH-cWW-L
Number of instances in this motif group
27

Unit IDs

6ENF|1|A|G|1310
6ENF|1|A|G|1311
6ENF|1|A|U|1312
6ENF|1|A|U|1313
*
6ENF|1|A|A|1603
6ENF|1|A|C|1604

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L34
Chain T
50S ribosomal protein L23

Coloring options:


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