IL_6ENF_155

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCC*GAGA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ENF_155 not in the Motif Atlas

Geometric match to IL_4P3T_002

Geometric discrepancy: 0.3153

The information below is about IL_4P3T_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01472.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

6ENF|1|a|U|997
6ENF|1|a|C|998
6ENF|1|a|C|999
*
6ENF|1|a|G|1041
6ENF|1|a|A|1042
6ENF|1|a|G|1043
6ENF|1|a|A|1044

Current chains

Chain a

16S ribosomal RNA

Nearby chains