IL_6ERI_006
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAACUG*CUUAGUAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_006 not in the Motif Atlas
- Homologous match to IL_7A0S_006
- Geometric discrepancy: 0.1171
- The information below is about IL_7A0S_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6ERI|1|AA|C|173
6ERI|1|AA|G|174
6ERI|1|AA|A|175
6ERI|1|AA|A|176
6ERI|1|AA|C|177
6ERI|1|AA|U|178
6ERI|1|AA|G|179
*
6ERI|1|AA|C|186
6ERI|1|AA|U|187
6ERI|1|AA|U|188
6ERI|1|AA|A|189
6ERI|1|AA|G|190
6ERI|1|AA|U|191
6ERI|1|AA|A|192
6ERI|1|AA|G|193
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AL
- 50S ribosomal protein L15, chloroplastic
- Chain AX
- 50S ribosomal protein L28, chloroplastic
Coloring options: