IL_6ERI_019
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAACC*GAGCUAGC
- Length
- 13 nucleotides
- Bulged bases
- 6ERI|1|AA|G|812, 6ERI|1|AA|G|816
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_019 not in the Motif Atlas
- Geometric match to IL_7RQB_018
- Geometric discrepancy: 0.1037
- The information below is about IL_7RQB_018
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.6
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6ERI|1|AA|G|685
6ERI|1|AA|A|686
6ERI|1|AA|A|687
6ERI|1|AA|C|688
6ERI|1|AA|C|689
*
6ERI|1|AA|G|810
6ERI|1|AA|A|811
6ERI|1|AA|G|812
6ERI|1|AA|C|813
6ERI|1|AA|U|814
6ERI|1|AA|A|815
6ERI|1|AA|G|816
6ERI|1|AA|C|817
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AE
- 50S ribosomal protein L4, chloroplastic
- Chain AL
- 50S ribosomal protein L15, chloroplastic
Coloring options: