IL_6ERI_098
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_098 not in the Motif Atlas
- Geometric match to IL_7A0S_094
- Geometric discrepancy: 0.0935
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ERI|1|AA|C|2669
6ERI|1|AA|U|2670
6ERI|1|AA|A|2671
6ERI|1|AA|G|2672
6ERI|1|AA|U|2673
6ERI|1|AA|A|2674
6ERI|1|AA|C|2675
*
6ERI|1|AA|G|2680
6ERI|1|AA|G|2681
6ERI|1|AA|A|2682
6ERI|1|AA|C|2683
6ERI|1|AA|C|2684
6ERI|1|AA|G|2685
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AG
- 50S ribosomal protein L6, chloroplastic
Coloring options: