IL_6ERI_099
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCUCU*AAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_099 not in the Motif Atlas
- Homologous match to IL_4WF9_101
- Geometric discrepancy: 0.1152
- The information below is about IL_4WF9_101
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
6ERI|1|AA|C|2697
6ERI|1|AA|C|2698
6ERI|1|AA|U|2699
6ERI|1|AA|C|2700
6ERI|1|AA|U|2701
*
6ERI|1|AA|A|2743
6ERI|1|AA|A|2744
6ERI|1|AA|G|2745
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AB
- 4.5S ribosomal RNA
- Chain AD
- 50S ribosomal protein L3, chloroplastic
- Chain AK
- 50S ribosomal protein L14, chloroplastic
- Chain AP
- 50S ribosomal protein L19, chloroplastic
Coloring options: