IL_6ERI_121
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAACAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 6ERI|1|BA|U|158
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_121 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.2026
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6ERI|1|BA|G|132
6ERI|1|BA|A|133
6ERI|1|BA|A|134
6ERI|1|BA|C|135
6ERI|1|BA|A|136
6ERI|1|BA|A|137
6ERI|1|BA|C|138
*
6ERI|1|BA|G|153
6ERI|1|BA|C|154
6ERI|1|BA|U|155
6ERI|1|BA|A|156
6ERI|1|BA|A|157
6ERI|1|BA|U|158
6ERI|1|BA|A|159
6ERI|1|BA|C|160
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BT
- 30S ribosomal protein S20, chloroplastic
Coloring options: