IL_6ERI_132
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 6ERI|1|BA|A|521
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_132 not in the Motif Atlas
- Homologous match to IL_6CZR_134
- Geometric discrepancy: 0.0903
- The information below is about IL_6CZR_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.5
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
6ERI|1|BA|C|518
6ERI|1|BA|G|519
6ERI|1|BA|U|520
6ERI|1|BA|A|521
6ERI|1|BA|A|522
6ERI|1|BA|A|523
6ERI|1|BA|G|524
*
6ERI|1|BA|C|830
6ERI|1|BA|G|831
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BE
- 30S ribosomal protein S5, chloroplastic
- Chain BL
- 30S ribosomal protein S12, chloroplastic
- Chain BQ
- 30S ribosomal protein S17, chloroplastic
Coloring options: