IL_6ERI_139
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UAGGG*UGGG
- Length
- 9 nucleotides
- Bulged bases
- 6ERI|1|BA|G|614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_139 not in the Motif Atlas
- Homologous match to IL_5J7L_033
- Geometric discrepancy: 0.1386
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6ERI|1|BA|U|611
6ERI|1|BA|A|612
6ERI|1|BA|G|613
6ERI|1|BA|G|614
6ERI|1|BA|G|615
*
6ERI|1|BA|U|689
6ERI|1|BA|G|690
6ERI|1|BA|G|691
6ERI|1|BA|G|692
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BF
- 30S ribosomal protein S6 alpha, chloroplastic
- Chain BO
- 30S ribosomal protein S15, chloroplastic
- Chain BR
- 30S ribosomal protein S18, chloroplastic
- Chain BU
- 30S ribosomal protein S21, chloroplastic
Coloring options: