IL_6ERI_148
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 6ERI|1|BA|C|884
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ERI_148 not in the Motif Atlas
- Homologous match to IL_5J7L_041
- Geometric discrepancy: 0.194
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6ERI|1|BA|G|883
6ERI|1|BA|C|884
6ERI|1|BA|A|885
*
6ERI|1|BA|U|1330
6ERI|1|BA|U|1331
6ERI|1|BA|C|1332
6ERI|1|BA|C|1333
6ERI|1|BA|C|1334
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BG
- 30S ribosomal protein S7, chloroplastic
- Chain BI
- 30S ribosomal protein S9, chloroplastic
- Chain BV
- Ribosome-binding factor PSRP1, chloroplastic
Coloring options: