IL_6ERI_150

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GACAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ERI_150 not in the Motif Atlas

Homologous match to IL_4LFB_039

Geometric discrepancy: 0.1932

The information below is about IL_4LFB_039

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_61370.1

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

4

Unit IDs

6ERI|1|BA|G|943
6ERI|1|BA|A|944
6ERI|1|BA|C|945
6ERI|1|BA|A|946
6ERI|1|BA|U|947
*
6ERI|1|BA|A|994
6ERI|1|BA|C|995

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BN

30S ribosomal protein S14, chloroplastic