IL_6ERI_164

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

6ERI|1|BA|C|1350, 6ERI|1|BA|A|1453

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ERI_164 not in the Motif Atlas

Homologous match to IL_5J7L_058

Geometric discrepancy: 0.1348

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

6ERI|1|BA|C|1349
6ERI|1|BA|C|1350
6ERI|1|BA|G|1351
*
6ERI|1|BA|C|1451
6ERI|1|BA|A|1452
6ERI|1|BA|A|1453
6ERI|1|BA|G|1454

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BV

Ribosome-binding factor PSRP1, chloroplastic