IL_6ERI_184

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCU*AAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ERI_184 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.2719

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

6ERI|1|AA|C|1430
6ERI|1|AA|C|1431
6ERI|1|AA|U|1432
*
6ERI|1|AA|A|1626
6ERI|1|AA|A|1627
6ERI|1|AA|A|1628
6ERI|1|AA|G|1629

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain Aw

50S ribosomal protein 5 alpha, chloroplastic