IL_6FEC_078
3D structure
- PDB id
- 6FEC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cap-dependent 48S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FEC_078 not in the Motif Atlas
- Homologous match to IL_4V88_464
- Geometric discrepancy: 0.2463
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6FEC|1|A|G|1697
6FEC|1|A|C|1698
6FEC|1|A|C|1699
6FEC|1|A|C|1700
*
6FEC|1|A|G|1823
6FEC|1|A|U|1824
6FEC|1|A|A|1825
6FEC|1|A|A|1826
6FEC|1|A|C|1827
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- Messenger RNA (26-MER)
- Chain N
- Transfer RNA; tRNA
- Chain j
- 40S ribosomal protein S14
- Chain k
- 40S ribosomal protein S26
Coloring options: