IL_6FEC_095
3D structure
- PDB id
- 6FEC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cap-dependent 48S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- UUUG*CUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FEC_095 not in the Motif Atlas
- Geometric match to IL_2OE8_002
- Geometric discrepancy: 0.2687
- The information below is about IL_2OE8_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34618.1
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6FEC|1|A|U|800
6FEC|1|A|U|801
6FEC|1|A|U|802
6FEC|1|A|G|803
*
6FEC|1|A|C|852
6FEC|1|A|U|853
6FEC|1|A|A|854
6FEC|1|A|G|855
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain G
- 40S ribosomal protein S11
- Chain I
- 40S ribosomal protein S4, X isoform
- Chain X
- 40S ribosomal protein S7
- Chain a
- 40S ribosomal protein S15a
Coloring options: