IL_6FRK_179

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

6FRK|1|5|G|119, 6FRK|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|5|C|118
6FRK|1|5|G|119
6FRK|1|5|A|120
6FRK|1|5|A|121
6FRK|1|5|U|122
*
6FRK|1|5|A|147
6FRK|1|5|C|148
6FRK|1|5|A|149
6FRK|1|5|U|150
6FRK|1|5|G|151
6FRK|1|5|U|152
6FRK|1|5|G|153

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain G

Ribosomal protein eL8

Chain N

Ribosomal protein L15

Chain h

Ribosomal protein uL29