IL_6FTG_003
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GAC*GCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_003 not in the Motif Atlas
- Geometric match to IL_6IA2_005
- Geometric discrepancy: 0.1293
- The information below is about IL_6IA2_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
6FTG|1|u|G|16
6FTG|1|u|A|17
6FTG|1|u|C|18
*
6FTG|1|w|G|139
6FTG|1|w|C|140
6FTG|1|w|C|141
Current chains
- Chain u
- 28S ribosomal RNA
- Chain w
- 5.8S ribosomal RNA
Nearby chains
- Chain N
- Ribosomal protein L15
- Chain X
- uL23
- Chain h
- eL29
Coloring options: