IL_6FTG_118
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- CCAAAUGCCUCG*CGCG
- Length
- 16 nucleotides
- Bulged bases
- 6FTG|1|u|A|3785, 6FTG|1|u|C|3791, 6FTG|1|u|C|3810
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_118 not in the Motif Atlas
- Homologous match to IL_8C3A_095
- Geometric discrepancy: 0.1324
- The information below is about IL_8C3A_095
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66080.1
- Basepair signature
- cWW-cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6FTG|1|u|C|3781
6FTG|1|u|C|3782
6FTG|1|u|A|3783
6FTG|1|u|A|3784
6FTG|1|u|A|3785
6FTG|1|u|U|3786
6FTG|1|u|G|3787
6FTG|1|u|C|3788
6FTG|1|u|C|3789
6FTG|1|u|U|3790
6FTG|1|u|C|3791
6FTG|1|u|G|3792
*
6FTG|1|u|C|3808
6FTG|1|u|G|3809
6FTG|1|u|C|3810
6FTG|1|u|G|3811
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain n
- 60s ribosomal protein l41
Coloring options: