IL_6FTG_124
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- GUGAGGC*GCUC
- Length
- 11 nucleotides
- Bulged bases
- 6FTG|1|u|G|4084, 6FTG|1|u|G|4086, 6FTG|1|u|G|4087, 6FTG|1|u|C|4162, 6FTG|1|u|U|4163
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTG_124 not in the Motif Atlas
- Homologous match to IL_5TBW_096
- Geometric discrepancy: 0.2087
- The information below is about IL_5TBW_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74114.1
- Basepair signature
- cWW-cWS-cWW-L-R
- Number of instances in this motif group
- 2
Unit IDs
6FTG|1|u|G|4082
6FTG|1|u|U|4083
6FTG|1|u|G|4084
6FTG|1|u|A|4085
6FTG|1|u|G|4086
6FTG|1|u|G|4087
6FTG|1|u|C|4088
*
6FTG|1|u|G|4161
6FTG|1|u|C|4162
6FTG|1|u|U|4163
6FTG|1|u|C|4164
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain G
- eL8
- Chain X
- uL23
- Chain w
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: