IL_6FTG_185

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|C|4466
6FTG|1|u|A|4467
6FTG|1|u|U|4468
6FTG|1|u|U|4469
6FTG|1|u|G|4470
*
6FTG|1|u|C|4485
6FTG|1|u|C|4486
6FTG|1|u|A|4487
6FTG|1|u|A|4488
6FTG|1|u|G|4489
6FTG|1|u|C|4490
6FTG|1|u|G|4491

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain H

uL6

Chain O

uL13

Chain V

uL14

Chain m

eL40