IL_6FTI_075
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTI_075 not in the Motif Atlas
- Homologous match to IL_8C3A_052
- Geometric discrepancy: 0.1459
- The information below is about IL_8C3A_052
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
6FTI|1|u|C|1911
6FTI|1|u|G|1912
6FTI|1|u|C|1913
6FTI|1|u|C|1914
6FTI|1|u|C|1915
6FTI|1|u|G|1916
6FTI|1|u|A|1917
6FTI|1|u|U|1918
*
6FTI|1|u|G|2064
6FTI|1|u|G|2065
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain F
- uL30
- Chain O
- uL13
- Chain S
- eL20
- Chain f
- eL33
Coloring options: