IL_6FTI_078
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 6FTI|1|u|U|1930, 6FTI|1|u|C|1931, 6FTI|1|u|G|2055, 6FTI|1|u|A|2057
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FTI_078 not in the Motif Atlas
- Geometric match to IL_5TBW_051
- Geometric discrepancy: 0.1397
- The information below is about IL_5TBW_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6FTI|1|u|C|1926
6FTI|1|u|U|1927
6FTI|1|u|C|1928
6FTI|1|u|A|1929
6FTI|1|u|U|1930
6FTI|1|u|C|1931
6FTI|1|u|A|1932
6FTI|1|u|G|1933
*
6FTI|1|u|C|2053
6FTI|1|u|U|2054
6FTI|1|u|G|2055
6FTI|1|u|G|2056
6FTI|1|u|A|2057
6FTI|1|u|G|2058
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain H
- uL6
- Chain M
- Ribosomal protein L14
- Chain O
- uL13
- Chain S
- eL20
- Chain m
- eL40
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