Motif IL_27086.1 Version IL_27086.1 of this group appears in releases 3.80 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 4-8 | 5-9 | 6-7 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5TBW_051 | 5TBW | 0.0000 | 4 | 1 | LSU rRNA | C | 1187 | U | 1188 | C | 1189 | A | 1190 | A | 1193 | G | 1194 | * | C | 1314 | U | 1315 | A | 1317 | G | 1319 | cWW | tWW | tWW | ntWH | cWW |
2 | IL_8C3A_054 | 8C3A | 0.0928 | 4 | 1 | LSU rRNA | C | 1183 | U | 1184 | C | 1185 | A | 1186 | A | 1189 | G | 1190 | * | C | 1310 | U | 1311 | A | 1313 | G | 1315 | cWW | tWW | tWW | ntWH | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CUCAUCAG*CUCAAG | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UCAUCA*UCAA | 2 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 |
---|---|---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Heat map statistics
- Min 0.09 | Avg 0.05 | Max 0.09
Coloring options: