IL_6FXC_077
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- AUU*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FXC_077 not in the Motif Atlas
- Geometric match to IL_4P3T_006
- Geometric discrepancy: 0.1873
- The information below is about IL_4P3T_006
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
6FXC|1|AA|A|2123
6FXC|1|AA|U|2124
6FXC|1|AA|U|2125
*
6FXC|1|AA|G|2218
6FXC|1|AA|C|2219
6FXC|1|AA|U|2220
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: