IL_6FXC_222
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- GUAAG*UGAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FXC_222 not in the Motif Atlas
- Homologous match to IL_5J7L_300
- Geometric discrepancy: 0.502
- The information below is about IL_5J7L_300
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_38862.4
- Basepair signature
- cWW-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6FXC|1|BA|G|1518
6FXC|1|BA|U|1519
6FXC|1|BA|A|1520
6FXC|1|BA|A|1521
6FXC|1|BA|G|1522
*
6FXC|1|BA|U|1558
6FXC|1|BA|G|1559
6FXC|1|BA|A|1560
6FXC|1|BA|G|1561
6FXC|1|BA|C|1562
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: