IL_6FXC_225
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- GCGAAC*GAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FXC_225 not in the Motif Atlas
- Homologous match to IL_4WF9_062
- Geometric discrepancy: 0.1006
- The information below is about IL_4WF9_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.4
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6FXC|1|BA|G|1695
6FXC|1|BA|C|1696
6FXC|1|BA|G|1697
6FXC|1|BA|A|1698
6FXC|1|BA|A|1699
6FXC|1|BA|C|1700
*
6FXC|1|BA|G|2031
6FXC|1|BA|A|2032
6FXC|1|BA|C|2033
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BD
- 50S ribosomal protein L3
- Chain BL
- 50S ribosomal protein L17
Coloring options: