IL_6FXC_320
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 6FXC|1|Ba|U|1296
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FXC_320 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.1876
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6FXC|1|Ba|U|1257
6FXC|1|Ba|A|1258
6FXC|1|Ba|C|1259
6FXC|1|Ba|A|1260
6FXC|1|Ba|A|1261
6FXC|1|Ba|A|1262
6FXC|1|Ba|G|1263
*
6FXC|1|Ba|C|1294
6FXC|1|Ba|A|1295
6FXC|1|Ba|U|1296
6FXC|1|Ba|A|1297
6FXC|1|Ba|A|1298
6FXC|1|Ba|A|1299
6FXC|1|Ba|G|1300
Current chains
- Chain Ba
- 16S ribosomal RNA
Nearby chains
- Chain Bg
- 30S ribosomal protein S7
- Chain Bi
- 30S ribosomal protein S9
- Chain Bj
- 30S ribosomal protein S10
- Chain Bn
- 30S ribosomal protein S14 type Z
Coloring options: