IL_6GC0_113
3D structure
- PDB id
- 6GC0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAAG*CCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GC0_113 not in the Motif Atlas
- Geometric match to IL_6CZR_361
- Geometric discrepancy: 0.3029
- The information below is about IL_6CZR_361
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_56539.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6GC0|1|A|G|1845
6GC0|1|A|G|1846
6GC0|1|A|A|1847
6GC0|1|A|A|1848
6GC0|1|A|G|1849
*
6GC0|1|A|C|1893
6GC0|1|A|C|1894
6GC0|1|A|C|1895
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
Coloring options: