IL_6GSL_028
3D structure
- PDB id
- 6GSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- GAGAG*UGGU
- Length
- 9 nucleotides
- Bulged bases
- 6GSL|1|13|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GSL_028 not in the Motif Atlas
- Homologous match to IL_4LFB_029
- Geometric discrepancy: 0.0822
- The information below is about IL_4LFB_029
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6GSL|1|13|G|662
6GSL|1|13|A|663
6GSL|1|13|G|664
6GSL|1|13|A|665
6GSL|1|13|G|666
*
6GSL|1|13|U|740
6GSL|1|13|G|741
6GSL|1|13|G|742
6GSL|1|13|U|743
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 5E
- 30S ribosomal protein S6
- Chain 6I
- 30S ribosomal protein S15
- Chain 9I
- 30S ribosomal protein S18
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