IL_6GXO_201
3D structure
- PDB id
- 6GXO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUGCA*UGGC
- Length
- 10 nucleotides
- Bulged bases
- 6GXO|1|a|G|1053, 6GXO|1|a|C|1054
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GXO_201 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.3858
- The information below is about IL_1GID_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
6GXO|1|a|G|1050
6GXO|1|a|C|1051
6GXO|1|a|U|1052
6GXO|1|a|G|1053
6GXO|1|a|C|1054
6GXO|1|a|A|1055
*
6GXO|1|a|U|1205
6GXO|1|a|G|1206
6GXO|1|a|G|1207
6GXO|1|a|C|1208
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain 7
- mRNA
- Chain c
- 30S ribosomal protein S3
- Chain n
- 30S ribosomal protein S14
- Chain v
- Peptide chain release factor RF1
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