IL_6GZ3_068
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6GZ3|1|A2|G|1607, 6GZ3|1|A2|A|1619, 6GZ3|1|A2|A|1620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ3_068 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.1172
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6GZ3|1|A2|G|1606
6GZ3|1|A2|G|1607
6GZ3|1|A2|G|1608
*
6GZ3|1|A2|U|1618
6GZ3|1|A2|A|1619
6GZ3|1|A2|A|1620
6GZ3|1|A2|U|1621
6GZ3|1|A2|C|1622
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AA
- Ribosomal protein L8
- Chain AN
- Ribosomal protein L15
- Chain AP
- ribosomal protein uL22
- Chain Aj
- Ribosomal protein L37
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