IL_6GZ3_105
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ3_105 not in the Motif Atlas
- Homologous match to IL_5TBW_067
- Geometric discrepancy: 0.2557
- The information below is about IL_5TBW_067
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
6GZ3|1|A2|C|2568
6GZ3|1|A2|G|2569
6GZ3|1|A2|A|2570
6GZ3|1|A2|U|2571
6GZ3|1|A2|C|2572
*
6GZ3|1|A2|G|2731
6GZ3|1|A2|G|2732
6GZ3|1|A2|G|2733
6GZ3|1|A2|A|2734
6GZ3|1|A2|G|2735
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AA
- Ribosomal protein L8
- Chain AG
- ribosomal protein eL8
- Chain AZ
- 60S ribosomal protein L27
- Chain Ag
- ribosomal protein eL34
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