IL_6GZ4_090

3D structure

PDB id

6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

6GZ4|1|A2|A|1941

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ4|1|A2|U|1938
6GZ4|1|A2|A|1939
6GZ4|1|A2|U|1940
6GZ4|1|A2|A|1941
6GZ4|1|A2|G|1942
6GZ4|1|A2|A|1943
6GZ4|1|A2|C|1944
6GZ4|1|A2|A|1945
6GZ4|1|A2|G|1946
*
6GZ4|1|A2|C|2003
6GZ4|1|A2|C|2004
6GZ4|1|A2|G|2005
6GZ4|1|A2|A|2006
6GZ4|1|A2|A|2007

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AK

ribosomal protein uL10

Chain AS

ribosomal protein eL20

Chain Am

ribosomal protein eL40