IL_6GZ4_190
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 6GZ4|1|B1|A|46
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ4_190 not in the Motif Atlas
- Homologous match to IL_4V88_387
- Geometric discrepancy: 0.1604
- The information below is about IL_4V88_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77761.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6GZ4|1|B1|G|41
6GZ4|1|B1|A|42
6GZ4|1|B1|U|43
6GZ4|1|B1|U|44
6GZ4|1|B1|A|45
6GZ4|1|B1|A|46
6GZ4|1|B1|G|47
*
6GZ4|1|B1|C|479
6GZ4|1|B1|G|480
6GZ4|1|B1|C|481
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BX
- ribosomal protein uS12
- Chain Ct
- eukaryotic elongation factor 2 (eEF2)
Coloring options: