IL_6GZ4_233
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 6GZ4|1|B1|C|1153, 6GZ4|1|B1|U|1155, 6GZ4|1|B1|G|1157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ4_233 not in the Motif Atlas
- Homologous match to IL_4V88_437
- Geometric discrepancy: 0.1984
- The information below is about IL_4V88_437
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62898.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6GZ4|1|B1|C|1091
6GZ4|1|B1|G|1092
6GZ4|1|B1|A|1093
*
6GZ4|1|B1|U|1152
6GZ4|1|B1|C|1153
6GZ4|1|B1|U|1154
6GZ4|1|B1|U|1155
6GZ4|1|B1|U|1156
6GZ4|1|B1|G|1157
6GZ4|1|B1|G|1158
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BC
- ribosomal protein eS28
- Chain BL
- ribosomal protein uS17
- Chain BN
- ribosomal protein uS15
- Chain BW
- ribosomal protein uS8
- Chain BX
- ribosomal protein uS12
- Chain Bb
- ribosomal protein eS27
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