IL_6GZ4_260
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 6GZ4|1|B1|C|1701, 6GZ4|1|B1|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ4_260 not in the Motif Atlas
- Homologous match to IL_4V88_463
- Geometric discrepancy: 0.2673
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6GZ4|1|B1|C|1700
6GZ4|1|B1|C|1701
6GZ4|1|B1|G|1702
*
6GZ4|1|B1|C|1833
6GZ4|1|B1|A|1834
6GZ4|1|B1|A|1835
6GZ4|1|B1|G|1836
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain An
- ribosomal protein eL41
- Chain BD
- ribosomal protein uS3
- Chain Ba
- ribosomal protein eS26
- Chain Bv
- Transfer RNA; tRNA
- Chain Bx
- mRNA
- Chain Ct
- eukaryotic elongation factor 2 (eEF2)
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