IL_6GZ4_286
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UCCUUU*AUUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZ4_286 not in the Motif Atlas
- Homologous match to IL_8C3A_401
- Geometric discrepancy: 0.1988
- The information below is about IL_8C3A_401
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02934.1
- Basepair signature
- cWW-L-R-L-cWW-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6GZ4|1|B1|U|116
6GZ4|1|B1|C|117
6GZ4|1|B1|C|118
6GZ4|1|B1|U|119
6GZ4|1|B1|U|120
6GZ4|1|B1|U|121
*
6GZ4|1|B1|A|343
6GZ4|1|B1|U|344
6GZ4|1|B1|U|345
6GZ4|1|B1|C|346
6GZ4|1|B1|G|347
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BE
- ribosomal protein eS4
- Chain BI
- ribosomal protein eS8
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