IL_6GZQ_027
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6GZQ|1|A1|A|1204
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_027 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.1685
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
6GZQ|1|A1|C|1046
6GZQ|1|A1|U|1047
6GZQ|1|A1|A|1048
6GZQ|1|A1|A|1049
6GZQ|1|A1|G|1050
*
6GZQ|1|A1|C|1201
6GZQ|1|A1|G|1202
6GZQ|1|A1|A|1203
6GZQ|1|A1|A|1204
6GZQ|1|A1|G|1205
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 5S ribosomal RNA; 5S rRNA
- Chain P1
- 50S ribosomal protein L20
- Chain Q1
- 50S ribosomal protein L21
- Chain Y1
- 50S ribosomal protein L30
Coloring options: