IL_6GZQ_163
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GGUCC*GGCC
- Length
- 9 nucleotides
- Bulged bases
- 6GZQ|1|A1|C|2416
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZQ_163 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.3359
- The information below is about IL_1GID_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
6GZQ|1|A1|G|2413
6GZQ|1|A1|G|2414
6GZQ|1|A1|U|2415
6GZQ|1|A1|C|2416
6GZQ|1|A1|C|2417
*
6GZQ|1|A1|G|2428
6GZQ|1|A1|G|2429
6GZQ|1|A1|C|2430
6GZQ|1|A1|C|2431
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain K1
- 50S ribosomal protein L15
- Chain W1
- 50S ribosomal protein L28
- Chain b1
- 50S ribosomal protein L33
- Chain d1
- 50S ribosomal protein L35
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