IL_6GZX_079
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CUAAGG*CCGAAG
- Length
- 12 nucleotides
- Bulged bases
- 6GZX|1|A2|A|1204
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZX_079 not in the Motif Atlas
- Geometric match to IL_9AXU_113
- Geometric discrepancy: 0.301
- The information below is about IL_9AXU_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74322.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
6GZX|1|A2|C|1046
6GZX|1|A2|U|1047
6GZX|1|A2|A|1048
6GZX|1|A2|A|1049
6GZX|1|A2|G|1050
6GZX|1|A2|G|1051
*
6GZX|1|A2|C|1200
6GZX|1|A2|C|1201
6GZX|1|A2|G|1202
6GZX|1|A2|A|1203
6GZX|1|A2|A|1204
6GZX|1|A2|G|1205
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain P2
- 50S ribosomal protein L20
- Chain Q2
- 50S ribosomal protein L21
- Chain Y2
- 50S ribosomal protein L30
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