IL_6GZZ_021
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GCACUG*CAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_021 not in the Motif Atlas
- Geometric match to IL_4V9F_035
- Geometric discrepancy: 0.3593
- The information below is about IL_4V9F_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6GZZ|1|A1|G|913
6GZZ|1|A1|C|914
6GZZ|1|A1|A|915
6GZZ|1|A1|C|916
6GZZ|1|A1|U|917
6GZZ|1|A1|G|918
*
6GZZ|1|A1|C|956
6GZZ|1|A1|A|957
6GZZ|1|A1|A|958
6GZZ|1|A1|A|959
6GZZ|1|A1|C|960
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 5S ribosomal RNA; 5S rRNA
- Chain L1
- 50S ribosomal protein L16
- Chain U1
- 50S ribosomal protein L25
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