IL_6GZZ_076
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_076 not in the Motif Atlas
- Homologous match to IL_7A0S_001
- Geometric discrepancy: 0.26
- The information below is about IL_7A0S_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6GZZ|1|A2|G|24
6GZZ|1|A2|U|25
6GZZ|1|A2|G|26
6GZZ|1|A2|G|27
6GZZ|1|A2|A|28
6GZZ|1|A2|U|29
6GZZ|1|A2|G|30
*
6GZZ|1|A2|C|537
6GZZ|1|A2|U|538
6GZZ|1|A2|G|539
6GZZ|1|A2|A|540
6GZZ|1|A2|A|541
6GZZ|1|A2|A|542
6GZZ|1|A2|C|543
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain P2
- 50S ribosomal protein L20
- Chain R2
- 50S ribosomal protein L22
- Chain a2
- 50S ribosomal protein L32
Coloring options: