IL_6GZZ_077
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GGCAC*GUGACC
- Length
- 11 nucleotides
- Bulged bases
- 6GZZ|1|A2|A|471
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_077 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3899
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
6GZZ|1|A2|G|35
6GZZ|1|A2|G|36
6GZZ|1|A2|C|37
6GZZ|1|A2|A|38
6GZZ|1|A2|C|39
*
6GZZ|1|A2|G|468
6GZZ|1|A2|U|469
6GZZ|1|A2|G|470
6GZZ|1|A2|A|471
6GZZ|1|A2|C|472
6GZZ|1|A2|C|473
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain E2
- 50S ribosomal protein L4
- Chain P2
- 50S ribosomal protein L20
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