IL_6GZZ_139
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GGC*GCAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_139 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.3474
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
6GZZ|1|A2|G|2468
6GZZ|1|A2|G|2469
6GZZ|1|A2|C|2470
*
6GZZ|1|A2|G|2509
6GZZ|1|A2|C|2510
6GZZ|1|A2|A|2511
6GZZ|1|A2|C|2512
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain D2
- 50S ribosomal protein L3
- Chain L2
- 50S ribosomal protein L16
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