IL_6GZZ_159
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- UGACC*GGG
- Length
- 8 nucleotides
- Bulged bases
- 6GZZ|1|A3|G|123, 6GZZ|1|A3|A|124
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_159 not in the Motif Atlas
- Homologous match to IL_5J7L_009
- Geometric discrepancy: 0.5604
- The information below is about IL_5J7L_009
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
6GZZ|1|A3|U|122
6GZZ|1|A3|G|123
6GZZ|1|A3|A|124
6GZZ|1|A3|C|125
6GZZ|1|A3|C|126
*
6GZZ|1|A3|G|225
6GZZ|1|A3|G|226
6GZZ|1|A3|G|227
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain P3
- 30S ribosomal protein S16
- Chain Q3
- 30S ribosomal protein S17
- Chain T3
- 30S ribosomal protein S20
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